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AN INTERACTIVE FIELD GUIDE TO EMBODIED NEUROSCIENCE

What if a brain’s wiring
could help explain behavior?

This is bigger than a fly. Scientists are moving from mapping a brain to testing how its connections could drive a body in a world.

Explore the idea below, then follow the decades of research that made it possible. Now using actual NeuroMechFly anatomy. The browser controller is still a simplified exhibit—not the research brain itself.

Discover why this matters ↓
01 / THE RESEARCH BODY, RECONTEXTUALIZED

Life, at the edge
of understanding.

Sense. Respond. Move. Sense again.

RESEARCH MESHES · MUJOCO · SIMPLIFIED CONTROL
Resting
ANATOMY ATLAS

Actual NeuroMechFly mesh shapes. Click a body part to explore it.

Preparing the specimen…
Drag to orbit · Scroll / pinch to zoom
SENSORIMOTOR ARENA 01
GO DEEPER / THE SCIENCE OF A RESPONSE

A drop of sugar.
A cascade of questions.

How does chemistry become electrical activity, and electrical activity become movement? Try the feeding experiment above, then explore the mechanisms—and the gaps between this exhibit and the research.

01 / SENSATION

Flies can taste with their feet.

Gustatory sensory neurons occur on the legs and mouthparts. Appetitive stimulation can contribute to a proboscis extension response. Taste is not the same as smell: antennal olfactory pathways sense volatile chemicals, whereas taste generally depends on contact.

Scott, 2018 · gustatory processing ↗
02 / TRANSFORMATION

A response travels through circuits.

Shiu and colleagues used connectivity and predicted neurotransmitters to build a simplified spiking model. Activating sugar-sensing neurons generated predictions about downstream activity and neurons involved in feeding initiation, including MN9-related output.

Shiu et al., 2024 · feeding predictions ↗
03 / ACTION

The proboscis extends.

The mouthparts unfold to bring the feeding surface toward a source. Real responses depend on context and internal state. Here, two added MuJoCo hinges animate the original mouth meshes; appetite and concentration are transparent toy rules, not fitted biological parameters.

INTERACTIVE / ONE NEURON, NOT A FLY BRAIN

Build up a signal.
Cross a threshold.

A leaky integrate-and-fire neuron is a simplified model: input raises a membrane-potential variable, leak pulls it back down, and crossing a threshold generates a spike followed by a reset.

Increase the input, add inhibition or change the time constant. Then send a pulse. This explains one modeling idea used by Shiu et al.; it does not reproduce their parameters, network or measurements.

NORMALIZED POTENTIAL0.00
TOY-MODEL SPIKES0
1.25
0.35 s

Normalized, slowed-down educational units. No measured neural activity.

What is a connectome—and what does it leave out?

A connectome records structural connections. It does not, on its own, specify every channel, synapse dynamic, neuromodulator, hormonal state, memory or learning rule. Connectivity constrains what a model can do, but additional assumptions are needed to make it run. That is why behavioral and physiological validation matter.

How does a microscope image become a brain map?

Electron microscopy reveals structures at fine spatial resolution. Reconstruction requires tracing cells across images, identifying synapses, proofreading segmentation and annotating cells. FlyWire combines machine assistance with extensive human and community work. The 2018 image volume, 2020 hemibrain and 2024 FlyWire reconstruction are distinct milestones, not interchangeable datasets.

What connects a brain model to a body?

Descending neurons carry signals toward downstream motor systems. A simulator still needs a mapping from neural output to controllers or forces. Eon reports hand-selected brain–body mappings and substantial reliance on existing NeuroMechFly controllers. Their technical account also says visual model activity did not yet substantially influence behavioral output in that version.

Read the technical limitations ↗
Why is the fly a powerful research organism?

Drosophila combines a comparatively small nervous system with rich behavior and a long history of genetic, physiological and behavioral tools. This makes it possible to compare computational predictions with targeted experiments. It is not a claim that a small brain is simple or that success transfers directly to a human brain.

What would make an emulation convincing?

Matching a video is not enough. Stronger evidence would compare neural dynamics, responses to perturbations, sensory processing, behavior across environments and internal states, and predictions on tests not used to construct the model. Accuracy is a spectrum, not a badge conferred by the word “upload.”

WATCH / FOLLOW THE SOURCES

See the story.
Then inspect the evidence.

Direct links to the actual video and its published chapter timestamps. These open on YouTube—nothing autoplays here. The video is commentary; the papers and Eon’s methods are the sources for technical claims.

02 / WHY THIS IS A MILESTONE
Back to the specimen ↑

Not just a fly.
A new way to ask how brains work.

A wiring diagram tells us which neurons connect. A simulation asks what those connections might do. Put that model in a body, and its outputs must deal with the consequences of action.

139,255neurons in the 2024 adult female
FlyWire whole-brain reconstruction
~50 millionchemical synapses mapped
in that same research dataset
One closed loopsensation → neural activity → movement
→ a new sensory experience

Research-scale numbers, not the number of neurons running on this page. Dorkenwald et al., Nature (2024) ↗

03 / PRIMARY-SOURCE EVIDENCE

These are the actual research figures.

Not generated illustrations. These figures show the distinction between reconstructing anatomy and testing a computational model.

FlyWire paper Figure 1: whole-brain reconstruction, data resources, brain regions and electron microscopy.
THE MAP / 2024

From electron microscopy to a whole-brain network.

The FlyWire reconstruction combines images, segmentation, proofreading and annotation. The colored structures are reconstructed neurons—not a live activity display.

Dorkenwald et al., Nature (2024), Fig. 1. Shown unmodified, resized to fit. CC BY 4.0. Original figure & caption ↗
Shiu paper Figure 1: integrate-and-fire model, sugar-response circuit and model predictions about feeding neurons.
THE TEST / 2024

Can the wiring predict a response to sugar?

Shiu and colleagues modeled how signals propagate and tested predictions about neurons involved in feeding initiation. A useful model must explain more than the appearance of movement.

Shiu et al., Nature (2024), Fig. 1. Shown unmodified, resized to fit. CC BY 4.0. Original figure & caption ↗
DECADES, NOT ONE MAGIC MOMENT

How we got here.

Select a chapter. Each breakthrough solved a different part of the problem.

CONCEPTUAL ILLUSTRATION / NOT CONNECTOME DATA
1986 / A FOUNDATIONAL MAP

Before a fly, there was a worm.

White, Southgate, Thomson and Brenner published their landmark reconstruction of the nervous system of C. elegans. It helped establish the ambition of connectomics: understand a nervous system by tracing its connections.

WHAT CHANGED

A nervous system could be treated as a concrete network to reconstruct—not only as a collection of isolated cells.

Explore the source ↗
THE 2026 DEMO / AN INTEGRATION, NOT ONE INVENTION

Four research threads. One feedback loop.

THE STRUCTURE

FlyWire

An adult brain’s wiring, with annotations and neurotransmitter predictions. A structural constraint, not a complete account of biology.

Dorkenwald et al., 2024 ↗
THE DYNAMICS

Brain & visual models

Shiu’s integrate-and-fire model and Lappalainen’s connectome-constrained visual model provide computational responses.

Lappalainen et al., 2024 ↗
THE BODY

NeuroMechFly v2

A biomechanical body, sensing and motor controllers. Eon reports that existing controllers do much of the work of producing behavior.

Wang-Chen et al., 2024 ↗
THE WORLD

MuJoCo

The physics engine that advances body dynamics. Coupling brain output to body control still requires engineering choices.

Todorov et al., 2012 ↗

According to Eon’s own methods, the brain–body interface uses hand-selected signals and mappings. A moving fly is not, by itself, evidence that every internal neural dynamic is biologically correct.

THE KEY IDEA / EMBODIMENT

A map is not yet
a behaving animal.

The important step is feedback. A brain model sends a motor command. The body moves. That movement changes what the model senses. Now the model must respond to a world it helped change.

  1. 01SenseA cue enters the system
  2. 02ComputeA model transforms the input
  3. 03ActA body changes its world
  4. ↺Sense againThe consequences return as input
01 / NEUROSCIENCE

Make explanations testable.

Change a connection or activate a circuit in a model, predict a behavior, then compare it with a real animal. The value is a hypothesis you can test—not an animation that merely looks alive.

02 / EMBODIED AI

Study intelligence in context.

Biological control depends on a body and its environment. These models give researchers a way to investigate how sensing and movement cooperate, and may inform new approaches to robotics.

03 / OPEN SCIENCE

Let others build on it.

Published connectomes, open body simulators and open physics tools let different teams inspect, challenge and extend the work. The progress comes from many contributors, not a single “upload” moment.

THE DISTINCTION THAT MATTERS

Extraordinary progress.
Not proof of a copied mind.

A connectome is not a complete account of a living brain. Cell dynamics, learning, internal state and the brain–body interface still matter. Eon’s own account describes hand-selected mappings, existing body controllers and significant unvalidated dynamics.

Here on this page: real MuJoCo physics, original NeuroMechFly anatomical mesh assets with modified browser dynamics, scripted behaviors and an illustrative signal network. Not running here: the FlyWire connectome, Eon’s brain model, a memory upload or a consciousness simulation.

Read Eon’s methods and limitations ↗
THE BIG QUESTION IS NOT “CAN WE ANIMATE A FLY?”

How much of behavior can we explain
by reconstructing the machinery that produces it?

Return to the experiment ↑
BEHIND THE EXPERIMENT

A brain needs a body.
A body needs a world.

Inspired by the embodied fly shown in your video: a sensory event changes a controller, which moves a body, which changes what it senses next.

What runs in this demo

Google DeepMind’s open-source MuJoCo 3.17 runs locally in your browser through WebAssembly. It integrates an adaptation of the actual open-source NeuroMechFly anatomical model: 39 original mesh files, 69 rendered anatomical parts and 87 source anatomical joints, two added exhibit-only mouth hinges, plus an assisted three-axis base. The mesh shapes and body hierarchy come from FlyGym v1.2.1, a model lineage based on X-ray microtomography. Original upstream mesh bytes are retained. This exhibit changes masses, gravity, solver settings, contact assumptions and controllers. Its scripted gait and assisted steering are not a reproduction of validated NeuroMechFly locomotion. Colors, surface textures and lighting are artistic; geometry is research-derived.

Foraging is a hand-written cue-seeking controller. Feeding extends the original mouth meshes using two added, scripted hinges and a small illustrative pumping rhythm; this is an illustration of proboscis extension, not measured or validated feeding kinematics. Appetite, cue type and concentration use explicit toy rules. Looming triggers a scripted walking escape, not real flight. Dust triggers a scripted grooming pattern. The neural view visualizes those controller signals with a synthetic network—not FlyWire neurons, measured spikes, consciousness, or a full-brain emulation. No real connectome dataset is loaded.

The real research

Eon’s research combines published connectome-based brain models with NeuroMechFly and hand-selected brain–body mappings. Eon also describes substantial limitations; even their research demonstration should not be confused with a perfect digital replica.

Adapted MuJoCo XML · Model provenance & mesh list · NeuroMechFly attribution · Software credits